miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Populus trichocarpa



ABOUT THIS RECORD

ID: MNEST052397
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10575-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTCTGATGGTGCTCTTTCA

miRNA*
AAAGGGACACAGGTCAGGATATG

mismatches: 1
bulges: 3

View larger
pre-miRNA
CTTTCTGAAAGGGACACAGGTCAGGATATGTCATTTGCAGATGCTAAGATATTTCGATTTGGAGATGGAGGCTGTGAGGATAGATTAAGTGACATTTCTG
ATGGTGCTCTTTCA
GTGGG


dot-bracket secondary structure
((..(((((((((.(((..(((((((.((((((((((...((.((.((.((((((......))))))....))...)).))....)))))))))))))))
)).)))))))))))
)..))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record





Liczniki na strone;